From: Jerry Mersel (jerry.mersel_at_weizmann.ac.il)
Date: Wed Jan 02 2008 - 04:32:26 PST
I manage to checkpoint matlab processes from the command line.
But when I want to use SGE I get the error:
/lib64/libc.so.6: relocation error: /lib64/tls/libpthread.so.0: symbol
errno, version GLIBC_PRIVATE not defined in file libc.so.6 with link
time reference
Restart failed: No such device or address
The relocation error I get on the start using cr_run.
The Restart failed I get when trying to restart.
I start matlab thus:
${BLCR_HOME}/bin/cr_run env LD_PRELOAD=libcr.so.0:libpthread.so.0 matlab
-nojvm -nodisplay -nosplash < $H/test.m
and try to restart thus:
${BLCR_HOME}/bin/cr_restart $ckptfile
my log file says this:
Jan 2 14:24:36 kam02 kernel: Skipping a socket.
Jan 2 14:24:36 kam02 kernel: Skipping a socket.
Jan 2 14:26:03 kam02 kernel: Failed to open chrdev major=5 minor=0
path='/dev/tty')
Jan 2 14:26:03 kam02 kernel: cr_restore_all_files [28703]: Unable to
restore fd 3 (type=6,err=-6)
Jan 2 14:26:03 kam02 kernel: cr_rstrt_child [28703]: Unable to restore
files! (err=-6)
Perhaps something to do with the socket.
What do you think?
Regards,
Jerry
P.S. I have prelinking turned off.
cat
Paul H. Hargrove wrote:
> Jerry Mersel wrote:
>
>> Hi:
>>
>> I am trying to migrate jobs on a grid after checkpointing.
>> Does the "prelinking" fix as mentioned in the faq must it be done
>> on the checkpointed node and the migrated to node?
>>
>> Regards,
>> Jerry
>
> Yes, the prelinking of libraries should be disabled on both the
> "checkpointed on" and "migrated to" nodes.
> I will clarify this in the next FAQ version.
>
> -Paul
>